Methods of Microarray Data Analysis III

Tutorials.- The Biology behind Gene Expression: A Basic Tutorial.- Monitoring the Quality of Microarray Experiments.- Outliers in Microarray Data Analysis.- Best Presentation Award.- Organ-Specific Differences in Gene Expression and Unigene Annotations Describing Source Material.- Analyzing Images.- Characterization, Modeling, and Simulation of Mouse Microarray Data.- Topological Adjustments to Genechip Expression Values.- Normalizing Raw Data.- Comparison of Normalization Methods for cDNA Microarrays.- Characterizing Technical and Biological Variance.- Simultaneous Assessment of Transcriptomic Variability and Tissue Effects in the Normal Mouse.- How Many Mice and How Many Arrays? Replication in Mouse cDNA Microarray Experiments.- Bayesian Characterization of Natural Variation in Gene Expression.- Investigating Cross Hybridization on Oligonucleotide Microarrays.- Quantification of Cross Hybridization on Oligonucleotide Microarrays.- Assessing the Potential Effect of Cross-Hybridization on Oligonucleotide Microarrays.- Who Are Those Strangers in the Latin Square?.- Finding Patterns and Seeking Biological Explanations.- Bayesian Decomposition Classification of the Project Normal Data Set.- The Use of Go Terms to Understand the Biological Significance of Microarray Differential Gene Expression Data.