Viral Metagenomics

<div>Host-Associated Bacteriophage Isolation and Preparation for Viral Metagenomics.-&nbsp;SmallRNAs Isolation from Tissues of Grapevine and Woody Plants.-&nbsp;Double Stranded RNA-Enriched Preparations to Identify Viroids by Next Generation Sequencing.-&nbsp;Viral Double-Stranded RNAs (dsRNAs) from Plants: Alternative Nucleic Acid Substrates for High-Throughput Sequencing.-&nbsp;Work-Up of Human Blood Samples for Deep Sequencing of HIV-1 Genomes.-&nbsp;Monolith Chromatography as Sample Preparation Step in Virome Studies of Water Samples.-&nbsp;Viral Metagenomics Approaches for High-Resolution Screening of Multiplexed Arthropod and Plant Viral Communities.-&nbsp;Different Approaches to Discover Mycovirus Associated to Marine Organisms.-&nbsp;Use of siRNAs for Diagnosis of Viruses Associated to Woody Plants in Nurseries and Stock Collections.-&nbsp;The Use of High Throughput Sequencing for the Study and Diagnosis of Plant Viruses and Viroids in Pollen.-&nbsp;High-Resolution Screening ofViral Communities and Identification of New Pathogens in Fish Using Next Generation Sequencing.-&nbsp;Metagenomic Analyses of the Viruses Detected in Mycorrhizal Fungi and their Host Orchid.-&nbsp;DNA Multiple Sequence Alignment Guided by Protein Domains: The MSA-PAD 2.0 Method.-&nbsp;From Whole Genome Shotgun Sequencing to Viral Community Profiling: The ViromeScan Tool.-&nbsp;Shannon Entropy to Evaluate Substitution Rate Variation among Viral Nucleotide Positions in Datasets of Viral siRNAs.-&nbsp;Insect Virus Discovery by Metagenomic and Cell Culture-Based Approaches.</div>