Computational Systems-Biology and Bioinformatics

Session 1. Modeling and Simulation of Biological Processes.- A Formal Model for Gene Regulatory Networks with Time Delays.- Modelling fim Expression in Escherichia Coli K12.- Study of the Structural Pathology Caused by CYP2C9 Polymorphisms towards Flurbiprofen Metabolism Using Molecular Dynamics Simulation.- 3D Structure Modeling of a Transmembrane Protein, Fatty Acid Elongase.- Session 2. Gene Expression Analysis.- Sequential Application of Feature Selection and Extraction for Predicting Breast Cancer Aggressiveness.- On Assigning Individuals from Cryptic Population Structures to Optimal Predicted Subpopulations: An Empirical Evaluation of Non-parametric Population Structure Analysis Techniques.- Extended Constraint-Based Boolean Analysis: A Computational Method in Genetic Network Inference.- Mining LINE-1 Characteristics That Mediate Gene Expression.- Session 3. Biological Sequence Analysis and Network Reconstruction.- Mining Regulatory Elements in Non-coding Regions of Arabidopsis thaliana.- Prediction of Non-coding RNA and Their Targets in Spirulina platensis Genome.- Reconstruction of Starch Biosynthesis Pathway in Cassava Using Comparative Genomic Approach.- Session 4. Bio-data Visualization and Biological Databases.- Catalog of Genetic Variations (SNPs and CNVs) and Analysis Tools for Thai Genetic Studies.- The Genome Atlas Resource.- INVERTER: INtegrated Variable numbER Tandem rEpeat findeR.- Design of an Enterobacteriaceae Pan-Genome Microarray Chip.- Session 5. Medical and Biomedical Informatics.- Multi-objective Particle Swarm Optimisation for Phase Specific Cancer Drug Scheduling.- A Vaccine Strategy for Plant Allergy by RNA Interference – An in Silico Approach.- Unsupervised Algorithms for Population Classification and Ancestry Informative MarkerSelection.- Genome-Based Screening for Drug Targets Identification: Application to Typhoid Fever.